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番木瓜GDP-D-甘露糖焦磷酸化酶基因的克隆及分析
Cloning and analysis of GDP-D-mannose pyrophosphorylase gene from papaya
【摘要】 采用cDNA末端快速扩增方法,获得了番木瓜果实GDP-D-甘露糖焦磷酸化酶(GMP)基因的cDNA全长序列,将其命名为CpGMP,GenBank登录号为FJ489652.然后,根据拼接序列设计开放性阅读框上、下游引物,扩增得到了CpGMP基因的开放性阅读框序列和DNA序列.ORF序列编码361个氨基酸,DNA序列包含4个外显子和3个内含子.序列分析表明,番木瓜GMP与大果黄褥花、桃、番茄、拟南芥、水稻GMP的同源性分别为90.30%、89.47%、88.92%、88.09%、85.87%.半定量RT-PCR分析表明,CpGMP基因随着番木瓜果实的成熟表达量逐渐增加,软化时又逐渐降低.
【Abstract】 The full-length GMP cDNA was cloned by RACE-PCR from papaya and the gene w as designated as CpGMP(GenBank accession No.FJ489652).Open reading frame which encoded 361 amino acids was cloned from cDNA.DNA sequence including 4 extrons and 3 introns was cloned from genomic DNA.Sequencing analysis showed that the amino acid sequence was 90.30%,89.47%,88.92%,8 8.09%,85.87% homologous with GMP from Malpighia glabra,peach, tomato,Arabidopsis thaliana and rice,respectively.Semi-quantitative RTPCR analysis showed that the expression of CpGMP increased gradually with pa paya fruit maturating and decreased when fruit began to soften.
【Key words】 papaya; GDP-D-mannose pyrophosphorylase; rapid amplification of cDNA ends; semi-quantitative RT-PCR;
- 【文献出处】 福建农林大学学报(自然科学版) ,Journal of Fujian Agriculture and Forestry University(Natural Science Edition) , 编辑部邮箱 ,2011年02期
- 【分类号】S667.9
- 【被引频次】7
- 【下载频次】126