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基于多重PCR的寡核苷酸基因芯片检测猪瘟病毒,猪繁殖与呼吸障碍综合征病毒及猪圆环病毒1型和2型

A multiplex PCR based oligonucleotide microarray for detection and differentiation of classical swine fever virus,porcine reproductive and respiratory virus and porcine circovirus types 1 and 2

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【作者】 姜永厚商晗武徐辉朱良俊丁先锋陈伟杰赵灵燕方立

【Author】 JIANG Yong-hou1,SHANG Han-wu2,XU Hui3,ZHU Liang-jun1,DING Xian-feng1,CHEN Wei-jie3,ZHAO Ling-yan3,FANG Li4 (1. College of Life Sciences,Zhejiang Sci-Tech University,Hangzhou 310018,China; 2. College of Life Sciences,China Jiliang University,Hangzhou 310018,China; 3. Centre of Animal Diesase Control of Zhejiang Province,Hangzhou 310020,China; 4. College of Animal Sciences,Zhejiang University,Hangzhou 310029,China)

【机构】 浙江理工大学生命科学学院中国计量学院生命科学学院浙江省动物疫病预防控制中心浙江大学动物科学学院

【摘要】 为了建立一种可同时检测区分猪瘟病毒(CSFV),猪繁殖与呼吸障碍综合征病毒(PRRSV)和猪圆环病毒2型(PCV-2)的寡核苷酸基因芯片方法,本研究针对每种病毒设计了4条~6条寡核苷酸探针,检测低限为1.6×104PCV-2拷贝数/μL,1.6×104CSFV拷贝数/μL,1.6×105PRRSV拷贝数/μL,比琼脂糖凝胶灵敏约10倍。利用建立的寡核苷酸基因芯片方法对76个仔猪样本进行了检测,检出了3种病毒的存在,其中25个样本(32.9%)同时感染了2种以上病毒。结果表明寡核苷酸基因芯片检测是一种快速、灵敏和高效的猪只混合感染病毒的病原学诊断方法。

【Abstract】 Porcine circovirus type 2 (PCV-2),classical swine fever virus (CSFV) and porcine reproductive and respiratory syn-drome virus (PRRSV) are important viruses that cause severe reproductive and/or respiratory failure in swine,and rapid and accu-rate detection and identification of these pathogens is critical for swine disease management. In the present study,we developed a multiplex polymerase chain reaction (PCR) based oligonucleotide microarray assay that included four to six specific oligonu-cleotides for each virus. The microarray was tested on three target viruses and 76 clinical specimens. The detection limit of the oligonucleotide microarray was 1.6×104,1.6×104,1.6×105 copies/μL for PCV-2,CSFV and PRRSV,respectively,which was 10-fold more sensitive than that of agarose gel. Co-infection with two or three viruses was detected in 26 specimens (32.8 %). Theresults indicated that the microarray detection system is a reliable and effective method for viral pathogen detection and identification even when multiple pathogens are present in a porcine clinical sample.

【基金】 浙江省科技计划项目(2008C22081);浙江省自然科学基金项目(Y3090166);浙江省科技攻关重点项目(2005C22032)
  • 【文献出处】 中国预防兽医学报 ,Chinese Journal of Preventive Veterinary Medicine , 编辑部邮箱 ,2010年03期
  • 【分类号】S852.65
  • 【被引频次】19
  • 【下载频次】364
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