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具有丙酮酸脱氢酶功能的家蚕Bm-l(1)基因的克隆及序列结构与表达研究

Molecular Cloning,Sequence Structure and Expression Analysis of Bm-l (1) Gene with Pyruvate Dehydrogenase Function in the Silkworm,Bombyx mori

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【作者】 王更先司马杨虎周嫣娜季明明徐世清

【Author】 WANG Geng-Xian1,2,3 SIMA Yang-Hu1,2 ZHOU Yan-Na2 JI Ming-Ming2 XU Shi-Qing1,2(1Department of Applied Biology,Medical College of Soochow University,Suzhou Jiangsu 215123,China;2National Engineering Laboratory for Modern Silk,Suzhou Jiangsu 215123,China;3Department of Biological Science,Handan College,Handan Hebei 056005,China)

【机构】 苏州大学医学部应用生物学系现代丝绸国家工程实验室邯郸学院生物科学系

【摘要】 丙酮酸脱氢酶(PDH)是丙酮酸脱氢酶复合体(PDC)中的前件酶,参与生成柠檬酸循环(TCA)的起始物乙酰辅酶A,决定生物体内营养成分的分配。利用电子克隆、RT-PCR和cDNA末端快速扩增(RACE)等方法克隆了与果蝇lethal(1)G0334基因类似的具有丙酮酸脱氢酶功能的家蚕Bm-l(1)基因。Bm-l(1)基因的cDNA全长为1 630 bp,由1 200 bp的完整ORF序列、186 bp的5’-UTR和207 bp的3’-UTR组成,含8个外显子和7个内含子,编码蛋白为399个氨基酸残基,分子质量43.93kD,pI 8.07。Bm-l(1)基因编码蛋白的69-365氨基酸残基为E1-dh结构域,该结构域为硫胺素焦磷酸依赖性脱氢酶所特有。蛋白质二级结构预测结果表明α螺旋占28.8%,β折叠占12.0%。采用Clustal W进行多序列比对发现,Bm-l(1)基因编码蛋白与赤拟谷盗等昆虫的PDH具有63%以上的序列相似性,且保守区域高度一致。Bm-l(1)基因mRNA在家蚕整个卵期、幼虫期、蛹期和刚羽化的成虫中,以及5龄3 d幼虫的头部、丝腺、生殖腺、脂肪体、中肠和血液6种组织中都有较高的转录水平,且存在较小的组织差异性。

【Abstract】 Pyruvate dehydrogenase (PDH) is the former enzyme in pyruvate dehydrogenase complex and participates in generating acetyl coenzyme A,the initiator of tricarboxylic acid (TCA) cycle.It also plays a decisive role in the distribution of nutrition composition.By means of in silico cloning,RT-PCR and rapid amplification of cDNA ends (RACE) technology,a full-length cDNA which was similar to Drosophila melanogaster lethal(1) G0344 gene with pyruvate dehydrogenase function was cloned from silkworm (Bombyx mori) and designated as Bm-l(1) .It is 1 630 bp long,contains a complete ORF of 1 200 bp,186 bp of 5’-UTR and 207 bp of 3’-UTR.Bm-l(1) gene contains 8 exons and 7 introns.It encodes 399 amino acids,with predicted molecular mass of 43.93 kD and isoelectric point of 8.07.The deduced amino acids showed that an E1-dh domain was located between the 69th and the 365th amino acid residues.This structural domain is uniquely owned by thiamine pyrophosphate dependent dehydrogenases.Protein seconda-ry structure prediction showed that 28.8% of the protein is composed of α helix and 12.0% of β sheet.Multiple sequence alignment with Clustal W program revealed that Bm-l(1) coded protein has over 63% sequence identity with PDHs from Tribolium castaneum and other insect species.Nevertheless,their conservative regions are in high consensus.Bm-l(1) mRNA had high transcriptional levels during the whole egg,larval,and pupal stages,and in emerging adults,head,silk gland,gonad,fat body,midgut and hemolymph of 3-day-old larvae of the 5th instar,and the difference between tissues was relatively low.

【基金】 国家重点基础研究发展计划“973”项目(No.2005CB12-1005)
  • 【文献出处】 蚕业科学 ,Science of Sericulture , 编辑部邮箱 ,2010年05期
  • 【分类号】S881.2
  • 【被引频次】3
  • 【下载频次】83
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