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Arithmetic computation using self-assembly of DNA tiles:subtraction and division

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【Author】 Xuncai Zhang a,b, Yanfeng Wang b, Zhihua Chen a, Jin Xu a,*, Guangzhao Cui b a The Key Laboratory of Image Processing and Intelligent Control, Department of Control Science and Engineering, Huazhong University of Science and Technology, Wuhan 430074, China b School of Electrical and Electronic Engineering, Zhengzhou University of Light Industry, Zhengzhou 450002, China

【摘要】 Recently, experiments have demonstrated that simple binary arithmetic and logical operations can be computed by the process of self- assembly of DNA tiles. In this paper, we show how the tile assembly process can be used for subtraction and division. In order to achieve this aim, four systems, including the comparator system, the duplicator system, the subtraction system, and the division system, are pro- posed to compute the difference and quotient of two input numbers using the tile assembly model. This work indicates that these systems can be carried out in polynomial time with optimal O(1) distinct tile types in parallel and at very low cost. Furthermore, we provide a scheme to factor the product of two prime numbers, and it is a breakthrough in basic biological operations using a molecular computer by self-assembly.

【Abstract】 Recently, experiments have demonstrated that simple binary arithmetic and logical operations can be computed by the process of self- assembly of DNA tiles. In this paper, we show how the tile assembly process can be used for subtraction and division. In order to achieve this aim, four systems, including the comparator system, the duplicator system, the subtraction system, and the division system, are pro- posed to compute the difference and quotient of two input numbers using the tile assembly model. This work indicates that these systems can be carried out in polynomial time with optimal O(1) distinct tile types in parallel and at very low cost. Furthermore, we provide a scheme to factor the product of two prime numbers, and it is a breakthrough in basic biological operations using a molecular computer by self-assembly.

【基金】 supported by the National Natural Science Foundation of China (Grant Nos. 60373089,60674106, 30570431, 30370356, and 60773122);the Pro-gram for New Century Excellent Talents in University(Grant No. NCET-05-0612);the Ph.D. Programs Founda-tion of Ministry of Education of China (Grant No.20060487014);the Chenguang Program of Wuhan (GrantNo. 200750731262);HUST-SRF (Grant No.2007Z015A)
  • 【文献出处】 Progress in Natural Science ,自然科学进展(英文版) , 编辑部邮箱 ,2009年03期
  • 【分类号】Q78
  • 【被引频次】21
  • 【下载频次】51
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