节点文献

紫菜外生细菌抑菌活性及其多聚酮合酶(PKSI)基因筛选

Antibacterial activity of Porphyra spp.epiphytic bacteria and polyketide synthase I gene screening

  • 推荐 CAJ下载
  • PDF下载
  • 不支持迅雷等下载工具,请取消加速工具后下载。

【作者】 方文雅杨锐朱鹏单媛媛严小军

【Author】 Wenya Fang~ 1,2 , Rui Yang~ 1,2 , Peng Zhu~ 1,2 , Yuanyuan Shan~ 1,2 , Xiaojun Yan~ 1,2 ( ~1Key Laboratory of Applied Marine Biotechnology, Ningbo University, Ningbo 315211, China)( ~2Marine Biotechnology Laboratory, Ningbo University, Ningbo 315211, China)

【机构】 宁波大学应用海洋生物技术教育部重点实验室宁波大学海洋生物工程重点实验室

【摘要】 【目的】基于紫菜外生细菌抑菌活性的研究,本文对具有广谱抑菌活性的菌株进行了多聚酮合酶(Polyketide synthase I,PKSI)基因的筛选,以期获得PKSI阳性菌株及探讨紫菜藻际微生物区系细菌的拮抗机制与PKSI途径的关系。【方法】利用琼脂柱法筛选出具广谱抑菌活性的菌株31株,以其基因组DNA为模板,设计引物扩增酮基合成酶(Ketosynthase,KS)片段基因并将其克隆到pMD19-T Vector,筛选出PKS I阳性菌,进行16S rDNA测序分析。【结果】紫菜外生细菌表现出广谱抑菌性。从温州病烂紫菜外生菌中筛选出3株具强抑菌活性的PKS I阳性菌,BLAST比对结果显示:菌株WPhG3、WPySw1和WPySw2扩增得到PKSI的KS结构域核苷酸序列所对应的氨基酸序列与Bacillus subtilis subsp.subtilis str.168(NP-389602)、Bacillus subtilis(ABR19776)和Aspergillus carbonarius(AAZ99721)的PKS I的KS结构域的同源性分别达到98%、99%和98%;16S rDNA系统发生学分析显示它们均与Bacillus的同源性最高。【结论】紫菜藻际微生物群落组成复杂,通过多条途径调节藻际微生物区系的平衡。PKS I途径可能是温州病烂紫菜外生菌Bacillus表现抑菌活性的一种方式。

【Abstract】 [Objective]Based on the antibacterial analysis, we screened Polyketide synthase (PKS I) gene from the epiphytic bacteria of Porphyra spp., in order to obtain the PKS I positive strains and detect the potential connection between the PKS pathway and the antibacterial mechanisms. [Methods] A total of 31 bacteria with broad-spectrum antibacterial activity were screened by agar-screening methods. The 16S rDNA and the Ketosynthase gene were amplified from the genome DNA of these bacteria, which were cloned into pMD19-T vector for sequencing analysis.[Results] Porphyra spp. epiphytic bacteria showed broad-spectrum antibacterial activity. Three PKS I positive epiphytic bacteria were obtained from Wenzhou rotten Porphyra spp. samples which had high antibacterial activity. The BLAST results indicated that the Ketosynthase fragments of PKS I from the strains of WPhG3, WPySw1 and WPySw2 shared highest similarity (98%, 99%, 98%) to the strains of Bacillus subtilis subsp. Subtilis str. 168 (NP_-389602), Bacillus subtilis (ABR19776) and Aspergillus carbonarius (AAZ99721), respectively. Furthermore, the phylogenetic analysis based on 16S rDNA sequences indicated that they belonged to the genus of Bacillus. [Conclusion] The flora of Porphyra spp. epiphytic bacteria was complex, which regulated the phycosphere in many ways. The PKS I pathway might be a performance of antibacterial function of Bacillus from Wenzhou rotten samples.

【基金】 国家自然科学基金(40776077);宁波市科技项目(2006A610082);教育部长江学者与创新团队项目(IRT0734)~~
  • 【文献出处】 微生物学报 ,Acta Microbiologica Sinica , 编辑部邮箱 ,2009年02期
  • 【分类号】Q933
  • 【被引频次】23
  • 【下载频次】541
节点文献中: 

本文链接的文献网络图示:

本文的引文网络