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新等位基因HLA-B~* 9537的确认和序列分析

Identification and sequence analysis of a novel allele HLA-B~* 9537

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【作者】 王东梅单小燕王立君何晓玫倪蕾崔爽王琳李伟刘娜赵波涛龚治尹张志欣宋长兴

【Author】 WANG Dongmei,SHAN Xiaoyan,WANGLijun,et al. Beijing Red Cross Blood Center,Beijing 100088,China

【机构】 北京市红十字血液中心北京市结核病胸部肿瘤研究所

【摘要】 目的识别并确认1个新的HLA等位基因。方法应用PCR-SSO,PCR-SSP基因分型技术对1份临床样本做HLA分型,对可能的HLA新等位基因进行分子克隆和DNA测序,分析与最同源的B*1504的差异。结果得到1份样本的序列与已知的所有HLA-B等位基因序列不一致,与B*1504的差异表现在第3外显子区域中的379G>C,409C>T,412G>A,419C>T,导致氨基酸分别由谷氨酸→天冬氨酸(E103D),苏氨酸→赖氨酸(T113K),谷氨酰胺→谷氨酸(Q114E)和丝氨酸→苯氨酸(S116F)。结论该基因为HLA-B位点的1个新等位基因,已被WHOHLA因子命名委员会正式命名为HLA-B*9537

【Abstract】 Objective To identify a novel HLA-Ballele of a Chinese.Methods An ambiguous result was found dur-ing routine SSO and PCR-SSP typing,and molecular cloning and DNA sequence analysis were further conducted.Results The sequence of this new allele indicated that it differed from the closet matching allele B*1504 in 4 nucleotide substitu-tions,i.e. 379 G>C ,409 C >T,412 G>A,and 419 C >Tin Exon3,resulting in 4 amino acid changed from Glu to Asp(E103D),Thr to Lys(T113K),Gln to Glu(Q114E) and Ser to Phe(S116F),respectively.Conclusion The novel allelewas identified,and was assigned the name B*9537 officially by the WHO Nomenclature Committee.

【关键词】 HLAHLA-B*9537新等位基因PCR-SSOSBT序列分析
【Key words】 HLA-B*9537Novel alleleHLAPCR-SSOSBT
  • 【文献出处】 中国输血杂志 ,Chinese Journal of Blood Transfusion , 编辑部邮箱 ,2009年06期
  • 【分类号】R450
  • 【被引频次】1
  • 【下载频次】56
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