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环境水体中肠道病原细菌的定量PCR检测

Detection of Enteric Pathogenic Bacteria from Surface Waters by Quantitative Polymerase Chain Reaction (QPCR)

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【作者】 刘永军张崇淼王晓昌吕英俊左丽丽

【Author】 LIU Yong-jun,ZHANG Chong-miao,WANG Xiao-chang,Lü Ying-jun,ZUO Li-li(Key Laboratory of Northwest Water Resource,Ecology and Environment,Ministry of Education,Xi’an University of Architecture and Technology,Xi’an 710055,China)

【机构】 西安建筑科技大学西北水资源生态与环境教育部重点实验室西安建筑科技大学西北水资源生态与环境教育部重点实验室 西安710055西安710055

【摘要】 采用通用引物,通过实时荧光定量PCR方法(QPCR),对西安市5处地表水体中肠道病原细菌的细胞密度进行4个月的连续检测,并将QPCR检测结果与滤膜法测得的大肠菌群CFU值进行比较分析.结果显示,QPCR法可信度为94%,最小检测值为每管未稀释DNA提取物含2.7个大肠杆菌细胞.5个水体(N=60)检测结果表明,QPCR检测结果是大肠菌群CFU的2.2~5倍.病原细菌的几何平均值范围,QPCR法在25~67000 CCE/100 mL之间,MF法大肠菌群为3~45000 CFU/100 mL之间.2种方法的离散和回归分析表明,QPCR检测结果与大肠菌群CFU显著正相关,秩相关系数为r=0.983.

【Abstract】 A rapid quantitative polymerase chain reaction(QPCR) analysis method with universal primers was developed to detect cell densities of the enteric pathogenic bacteria from 5 surface water of Xi’an City for 4 months continuously.And the detection results by QPCR method were compared with counts of coliforms colony-forming units(CFU) determined by membrane filter(MF) analysis.The results showed that QPCR method had an estimated 94% confidence,and detection limit was 2.7 Escherichia coli cells per sample in undiluted DNA extracts.For five surface waters(N=60),the geometric mean of pathogenic bacteria concentration determined by QPCR was 2.2-5 times of corresponding coliform CFU determined by MF analysis.Using QPCR analysis,these geometric means of pathogenic bacteria concentration ranged from 25(CCE/100 mL) to(67?000)(CCE/100 mL.) Using MF culture analysis,coliforms ranged from 3(CFU/100 mL) to(45?000)(CFU/100 mL.) Regression analysis showed that there was a significant positive correlation between pathogenic bacteria determined by QPCR method and coliforms determined by MF method,the correlation coefficient(r) was 0.983.

【基金】 国家自然科学基金项目(50478048);国家自然科学基金重大国际合作项目(50621140001);西安市科技计划项目(YF07196)
  • 【文献出处】 环境科学 ,Environmental Science , 编辑部邮箱 ,2008年05期
  • 【分类号】X832
  • 【被引频次】17
  • 【下载频次】761
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