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Characterization of PolyA and PolyC mismatches by Raman spectroscopy

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【作者】 廖昱博孟耀勇雷浩东王英

【Author】 Yubo Liao(廖显博)~(1,2),Yaoyong Meng(孟耀勇)~1,Haodong Lei(雷浩东)~1,and Ying Wang(王英)~3 ~1 Photonic Chinese Medicine Lab,South China Normal University,Guangzhou 510631 ~2 School of Physics and Electronic Information Science,Gannan Teachers College,Ganzhou 341000 ~3 Guangzhou Institute of Geochemistry,Chinese Academy of Sciences,Guangzhou 510631

【机构】 Photonic Chinese Medicine Lab South China Normal UniversityPhotonic Chinese Medicine LabSouth China Normal UniversityGuangzhou Institute of GeochemistryChinese Academy of SciencesGuangzhou 510631 School of Physics and Electronic Information ScienceGannan Teachers CollegeGanzhou 341000Guangzhou 510631

【摘要】 <正>A·C mismatches are studied by Raman spectral characterization of PolyA,PolyC,and their equimolar complex in solution of 0.14 mol/L Na+,pH7.0.Experimental results show that A·C mismatches occur to be A/B(mainly A)conformers,and unlike Watson-Crick base pairing,this kind of mismatches is stabilized by only one hydrogen bond involving cytosine N4H2 and adenine N7.The formation of A·C complex makes the base stacking interactions much stronger,and conformation of the backbone more ordered,which leads to obvious Raman hypochromic effect with some shifts in corresponding bands.

【Abstract】 A·C mismatches are studied by Raman spectral characterization of PolyA,PolyC,and their equimolar complex in solution of 0.14 mol/L Na+,pH7.0.Experimental results show that A·C mismatches occur to be A/B(mainly A)conformers,and unlike Watson-Crick base pairing,this kind of mismatches is stabilized by only one hydrogen bond involving cytosine N4H2 and adenine N7.The formation of A·C complex makes the base stacking interactions much stronger,and conformation of the backbone more ordered,which leads to obvious Raman hypochromic effect with some shifts in corresponding bands.

【关键词】 unlikebackbonepairingbandsstackingconformationCrickadenineWatsoncytosine
【基金】 This work was supported by the Natural Science Foundation of Guangdong Province(No.021093 and 05001873);the Keystone Science and Technology Foundation of Guangdong Province(No.2KM04502S)
  • 【文献出处】 Chinese Optics Letters ,中国光学快报(英文版) , 编辑部邮箱 ,2008年01期
  • 【分类号】O433
  • 【下载频次】86
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