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三维全息原子场作用矢量用于吡咯类抗艾滋病药物QSAR研究

QSAR Studies of Pyrrole Derivatives Anti-HIV Drug using Three-dimensional Holographic Vector of Atomic Interaction Field

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【作者】 仝建波刘淑玲刘玉婷李仲谨韩玉英王先锋

【Author】 TONG Jian-bo,LIU Shu-ling,LIU Yu-ting,LI Zhong-jin,HAN Yu-ying,WANG Xian-feng (College of Chemistry & Chemical Engineering,Shaanxi University of Science & Technology,Xi’an 710021)

【机构】 陕西科技大学化学与化工学院陕西科技大学化学与化工学院 西安710021西安710021

【摘要】 采用三维全息原子场作用矢量(3D-HoVAIF)对32个吡咯类抗艾滋病药物进行结构参数化表征,并与其活性建立定量构效关系。分别采用多元线性回归(MLR)和偏最小二乘(PLS)进行建模,建模的复相关系数(R2cum)、交互校验复相关系数(Q2cum)和模型的标准偏差(SD)分别为R2cum=0.914、Q2cum=0.812、SD=0.236(MLR);R2cum=0.836、Q2cum=0.719、SD=0.314(PLS),结果均优于文献值(R2cum=0.667,Q2cum=0.581,SD=0.420)。所建模型具有良好的稳定性和预测能力,表明3D-HoVAIF能够较好地表征该类分子的结构,值得进一步推广应用。

【Abstract】 A newly developed three-dimensional holographic vector of atomic interaction field(3D-HoVAIF) was used to describe the structure of anti-HIV drug-32 pyrrole derivatives.Quantitative structure-activity relationship(QSAR) between the 3D-HoVAIF parameters and activity of pyrrole analogous were generated by multiple linear regression(MLR) and partial least square regression(PLS) with variable screening by the stepwise multiple regression technique and statistics.The cumulative multiple correlation coefficient(R2cum),Leave-One-Out(LOO) Cross-Validated(CV) correlation coefficient(Q2cum) and standard deviation for the training set(SD) were R2cum=0.914,Q2cum=0.812,SD=0.236(MLR);R2cum=0.836;Q2cum=0.719;SD=0.314(PLS),respectively,which were all better than that in previous report(R2cum=0.667,Q2cum=0.581,SD=0.420).The results showed that the models had favorable stability and better prediction capabilities and 3D-HoVAIF was applicable to the molecular structural characterization and biological activity prediction.

【基金】 陕西科技大学博士科研启动基金(BJ07-03,BJ07-04);国家自然科学基金(No.50573046);陕西省教育厅专项科研计划
  • 【文献出处】 分析科学学报 ,Journal of Analytical Science , 编辑部邮箱 ,2008年03期
  • 【分类号】R914
  • 【被引频次】18
  • 【下载频次】210
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