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水稻转录因子OsBP-73靶基因的初步筛选

Preliminary Screening of Target Genes of Rice Transcription Factor OsBP-73

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【作者】 刘淑敏王宗阳蔡秀玲

【Author】 LIU Shu-Min~(1,2) WANG Zong-Yang~1 CAI Xiu-Ling~(1*) ~1Institute of Plant Physiology and Ecology,Shanghai Institutes for Biological Sciences,Chinese Academy of Sciences,Shanghai 200032,China;~2School of Life Sciences,East China Normal University,Shanghai 200062,China

【机构】 中国科学院上海生命科学研究院植物生理生态研究所中国科学院上海生命科学研究院植物生理生态研究所 上海 200032 华东师范大学生命科学学院上海 200062上海 200032

【摘要】 OsBP-73是用酵母单杂交系统,以水稻蜡质基因(Wx)的顺式作用元件为诱饵,从水稻cDNA表达文库中筛选获得的转录因子。本文以OsBP-73基因为例介绍了用"下拉"(pull-down)方法筛选转录因子靶基因的一般步骤。将含有该基因DNA结合功能域的cDNA片段构建到原核表达载体上,并在大肠杆菌中诱导表达获得其蛋白p73。用纯化后的p73蛋白通过"下拉"实验对OsBP-73靶基因进行初步筛选,获得了22个阳性克隆,为进一步研究转录因子OsBP-73参与的水稻转录调控网络提供依据。

【Abstract】 Previous data showed that a 31-bp(from -840 bp to-810 bp)DNA fragment located at the 5’ upstream region of rice waxy gene could inter- act with nuclear protein extracted from develop- ing endosperm of rice.When this 31 bp DNA se- quence was used as a bait to screen a rice cDNA library with a yeast one-hybrid system,three groups of cDNA clones were isolated.One of them is pC73,the correspondent rice gene of pC73 was named as OsBP-73(Oryza sativa binding protein). A pull-down assay was made to identify the target genes of transcription factor by using genomic DNA and recombinant p73 protein.The cDNA fragment containing DNA-binding domain of OsBP-73 was cloned into expression vector pET28-c(+)(Fig.1)to produce protein p73,fused with a his6-tag,from E.coli BL21(DE3)(Fig.2). The p73 was purified with Ni-NTA under native condition(Fig.3).The target genes of p73 were identified in rice genome-wide by using a pull- down assay,and 22 candidate genes were obtained (Figs.4 and 5,and Table 1).The obtained results show that putative light-repressible receptor pro- tein kinase and GAMYB-binding protein could serve as targets of the OsBP-73,suggesting that OsBP-73 might be involved in light signal transduction.

【关键词】 OsBP-73靶基因“下拉”实验
【Key words】 OsBP-73target genespull-down
【基金】 中国科学院上海生命科学研究院植物生理生态研究所创新前沿项目资助。~~
  • 【文献出处】 植物生理与分子生物学学报 ,Journal of Plant Physiology and Molecular Biology , 编辑部邮箱 ,2007年05期
  • 【分类号】S511;Q943
  • 【被引频次】1
  • 【下载频次】441
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