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应用PCR-RFLP技术检测阿德福韦耐药相关性HBV变异

Application of PCR-RFLP in detection of adefovir dipivoxil resistance-associated mutations in hepatitis B virus

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【作者】 毛日成张继明尹有宽秦艳丽章婉琴邬祥惠翁心华

【Author】 MAO Ri-cheng ZHANG Ji-ming YIN You-kuan QIN Yan-li ZHANG Wan-qin WU Xiang-hui WENG Xin-hua (Department of Infectious Diseases and Center of Liver Diseases,Huashan Hospital,Fudan University,Shanghai 200040,China)

【机构】 复旦大学附属华山医院传染科华山医院肝病中心复旦大学附属华山医院传染科华山医院肝病中心 上海 200040上海 200040

【摘要】 目的建立一种简便、快速、实用的检测阿德福韦(ADV)耐药相关性HBV变异(rtA181V/T/S和rtN236T变异)的方法。方法根据GenBank收录的HBV基因全序设计套式-PCR引物,使野毒株的PCR产物上游末端引入BglI的酶切位点,使rt236变异株的PCR产物下游末端引入BseDI(SecI)的酶切位点,建立PCR-限制性片段长度多态性(RFLP)方法。用此方法分别检测含rt181变异株、rt236变异株及野毒株质粒和3例ADV耐药慢性乙型肝炎患者血清标本。将变异株和野毒株配成不同比例,再用此方法检测,以了解该方法的敏感性。结果本研究建立的PCR—RFLP方法可同时检测rt181变异和rt236变异;用此方法检测血清标本,结果与测序及克隆分析一致;此方法可检测出标本中10%的变异株。结论应用PCR- RFLP方法可同时检测rtA181V/T/S和rtN236T变异,具有较高的敏感性,可用于ADV耐药变异的早期诊断。

【Abstract】 Objective To establish a convenient,accurate and practical method for detection of adefovir dipivoxil resistance-as- sociated mutation in hepatitis B virus:rtA181V/T/S and rtN236T mutations.Methods According to HBV complete sequences in GenBank,two pairs of primers were designed to amplify the region of HBV reverse transcriptase in order to introduce a BglI restriction site upon PCR product of wild type (wt) and a BseDI restriction site upon PCR product of rt236 mutant type.After amplification,the PCR products were digested with BglI and BseDI separately.We used this method to detect wild,rt181 mu- tant,rt236 mutant plasmids and 3 chronic hepatitis B patients’ serum with obvious ADV resistance-associated mutations.We also tested the sensitivity of this method by mixing the wild and mutant plasmids in different proportions.Results The method could detect rt181 and rt236 mutations simultaneously.The result of RFLP analysis was in accordance with that of DNA se- quencing and cloning analysis.This method could detect the mutants even when they comprised only 10% of the total virus population.Conclusions The PCR-RFLP method with high sensitivity can detect rt181 and rt236 mutations simultaneously.It can be used for early detection of ADV resistance-associated mutation in hepatitis B virus.

【基金】 上海市科委临床医学重点项目(编号:054119529)
  • 【文献出处】 中国感染与化疗杂志 ,Chinese Journal of Infection and Chemotherapy , 编辑部邮箱 ,2007年05期
  • 【分类号】R450
  • 【被引频次】2
  • 【下载频次】109
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