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比较全血DNA提取法适用单核苷酸多态性分析

Comparison of two methods for Genomic DNA extraction from whole blood and its application in SNP analysis

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【作者】 彭翠英陈琳玲秦志峰胡卫民李凯廖端芳李国庆

【Author】 PENG Cui- ying1,2,CHEN Lin- ling1, QIN Zhi- feng2, HU Wei- min3,LI Kai1, LIAO Duan- fang1, LI Guo- qing2(1.SNP Institute, 2.Department of Cell Biology and Genetics, Nanhua University Hengyang,Hunan 421001, P.R.China; 3.Central Hospital of Loudi, Loudi, Hunan 417000, P.R.China)

【机构】 南华大学SNP研究所南华大学SNP研究所南华大学细胞生物学与遗传学教研室娄底中心医院南华大学细胞生物学与遗传学教研室 南华大学细胞生物学与遗传学教研室湖南衡阳421001湖南娄底417000湖南衡阳421001

【摘要】 目的比较两种提取冰冻全血基因组DNA的方法,即分离白细胞法和裂解红细胞法所获得基因组DNA的质量。方法分别测定所获DNA的效率和纯度,同时,笔者用PCR/SNP敏感性分子开关技术,对两种方法获得的模板DNA进行单核苷酸多态性(single-nucleotidepolymorphism,SNP)分析。结果结果显示分离白细胞法DNA产量与纯度均高,裂解红细胞法获得的DNA产量、纯度相对较低;PCR/SNP敏感性分子开关检测表明:分离白细胞法和裂解红细胞法制备的DNA模板,均可在体外进行有效的PCR扩增,但分离白细胞法获得的目的DNA带特异性凸显,而裂解红细胞法获得的目的带特异性相对较差。结论预先分离纯化白细胞是从冰冻全血中获得较高纯度DNA和有效提高DNA产量的重要操作步骤。

【Abstract】 【Objective】To compare the purities and yields of the DNA extracted from prior purified leukocyteswith those surviving from intentional RBC breakage of blood samples.【Methods】Frozen blood samples were usedin this study. The DNA yields and the OD260/OD280 ratio were determined with UV spectrometer. DNA templatesisolated by the two methods were analyzed using the sensitive on/off switch of PCR/SNP.【Results】Our results showthat the yield and purity of DNAs extracted from frozen blood with prior purified leukocytes are higher than thosefrom prior erythrocyte lysis. The DNAs from the two methods were both effectively amplifiable, but more sharp bandswere observed using DNA templates from the method of isolated leukocytes. Some non- specific bands were seen atthe PCR products when DNAs from the method of lysising. red cells were used as templates.【Conclusion】Priorpurification of leukocytes is a simple and useful step in DNA extraction method. In our experience, this step is moreimportant for frozen blood sample.

【基金】 国家自然科学基金资助(30171084);国家973项目部分资助(G2000056905)
  • 【文献出处】 中国现代医学杂志 ,China Journal of Modern Medicine , 编辑部邮箱 ,2005年15期
  • 【分类号】R446.9
  • 【被引频次】4
  • 【下载频次】542
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