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条斑紫菜抗坏血酸过氧化物酶基因的cDNA克隆和序列分析(英文)

cDNA cloning and sequence characterization of an ascorbate peroxidase from marine red alga Porphyra yezoensis

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【作者】 马凌波张凤英马春艳王素娟

【Author】 MA Ling-bo~(1),ZHANG Feng-ying~(1),MA Chun-yan~(1),WANG Su-juan~(2) ry of Agriculture,East China Sea Fisheries Research Institute,Chinese Academy of Fishery Sciences,Shanghai 200090,China;2.Shanghai Fisheries University,Shanghai 200090,China)

【机构】 农业部海洋与河口渔业重点开放实验室中国水产科学研究院东海水产研究所上海水产大学 上海 2 0 0 0 90上海 2 0 0 0 90上海2 0 0 0 90

【摘要】 利用细胞质抗坏血酸过氧化物酶(APX)基因部分片段为探针,从条斑紫菜(Porhyrayezoensis)叶状体的cDNA文库中筛选出1种新型的编码APX的全长cDNA克隆。该克隆开放阅读框编码242个氨基酸,与高等植物已知的胞质APX序列相似,同时具有两个特征性的保守区域。推导的氨基酸序列具有与在一种单细胞红藻(Galdieriapartite)中发现的APX B相似的杂交类型结构,这种结构可能是红藻或者非绿色光合生物的APX的重要特征。该cDNA克隆编码区G+C含量达到63 7%,其中密码子的第3位G+C含量高达88 4%。本实验得到的抗坏血酸过氧化物酶基因的cDNA序列已登录到GenBank数据库中,登录序号为:AY282755。

【Abstract】 Screening of a cDNA library from Porphyra yezoensis with probe based upon cytosolic ascorbate peroxidase (APX,EC 1.11.1.11) genes identified a full-length clone apparently encoding a novel type of ascorbate peroxidase.The clone contained an open reading frame for a protein of 242 amino acids,which exhibited sequence similarity to known cytosolic APX from higher plants and contained two motifs conserved in peroxidases.The deduced amino acid sequence of P.yezoensis APX showed a hybrid-type structure,which was only found previously in an APX-B from a unicellular red alga Galdieria partite,similar to both chloroplastic and cytosolic isoforms of higher plants.It was possible that the hybrid-type structure was an important characteristic of red algal APX.APX cDNA from P.yezoensis showed a high (G+C) content (88.4% in the third-base position and 63.7% total) in the coding region.The nucleotide sequence data reported in this paper will appear in the GenBank database under accession number AY282755.

【基金】 ChineseAcademyofFisherySciencesGrant(2 0 0 3 -0 8)
  • 【文献出处】 中国水产科学 ,Journal of Fishery Sciences of China , 编辑部邮箱 ,2005年03期
  • 【分类号】S917.3
  • 【被引频次】26
  • 【下载频次】290
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