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马铃薯Y病毒河北分离物外壳蛋白基因序列分析和株系鉴定

Coat Protein Gene Sequence Analysis and Identification of a Potato Virus Y Hebei Isolate

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【作者】 吴志明董志茹刘小娟温春秀谢晓亮张庆良

【Author】 Wu Zhiming1, Dong Zhiru 1,2 , Liu Xiaojuan1, Wen Chunxiu1, Xie Xiaoliang 1* , and Zhang Qingliang3 ( 1Insititute of Economic Crop Research, Hebei Academy of Agricultural and Forestry Sciences,Shijiazhuang 050051,China; 2Equipment Station of Baoding Education Buerau, Baoding 071000, China; 3Hebei Green Agriculture Technology Co. Ltd., Shijiazhuang 050051,China)

【机构】 河北省农林科学院经济作物研究所,河北省农林科学院经济作物研究所,河北省农林科学院经济作物研究所,河北省农林科学院经济作物研究所,河北省农林科学院经济作物研究所,河北科润农业技术有限公司 石家庄050051,石家庄050051保定市教育局仪器站,保定071000,石家庄050051,石家庄050051,石家庄050051,石家庄050051

【摘要】 对河北张家口感病马铃薯的一个马铃薯Y病毒分离物(PXYHBEI)的外壳蛋白基因进行了克隆和序列分析。以提取的RNA为模板,应用RTPCR扩增目的基因,扩增产物克隆到质粒pGEMT,上并序列分析。结果表明,克隆cDNA片段由801个核苷酸组成,编码267个氨基酸。与基因库中PVY代表株系相比,它们的核苷酸和氨基酸序列同源性分别为89.6%~98.8%和93.3%~98.5%,与PVYN和PVYO株系的氨基酸序列同源性分别为93.6%和97.8%,确定PVYHBEI归属于普通株系(PVYO株系),同时建立了快速、灵敏、简便的PVYRTPCR检测方法。

【Abstract】 A potato virus Y isolate(PVY-HBEI)was obtained from infected potato plants cultivated in Zhangjiakou City of Hebei Province.The coat protein gene (CP) was amplified from the extracted plant total RNA by using RT-PCR, and cloned into the pGEM-T vector and sequenced. The cloned segment was 801 bp and encodes 267 amino acid residues.It was cpmpared with other PVY isolates reported in GenBank.It shares 89.6%-98.8% and 93.3%-98.5% homology in nucleotide and the putative amino acid sequence,respectively,which suggested that the CP gene of PVY isolates is a relatively conserved sequence within the PVY genome,the homology between PVY-HBEI and PVY N and PVY O were 93.6% and 97.8%,resepectivly,thus it was identified as an isolate of PVY O ,the experiment also provided a rapid,sensitive and relatively inexpensive methods of PVY RT-PCR detection.

  • 【文献出处】 园艺学报 ,Acta Horticulturae Sinica , 编辑部邮箱 ,2005年02期
  • 【分类号】S435.32
  • 【被引频次】11
  • 【下载频次】190
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