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染色体20q13区域SNP与中国人2型糖尿病的相关性

Association of SNP in Chromosome 20q13 with Type 2 Diabetic in Chinese

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【作者】 张宏利朱鋐达骆天红王琴琴苏莉珍陆骆赵列宾戴蒙刘优萍李纪平刘赟李果罗敏

【Author】 ZHANG Hong-li, ZHU Hong-da, LUO Tian-hong, WANG Qin-qin, SU Li-zhen, LU Luo, ZHAO Lie-bin, DAI Meng, LIU You-ping, LI Ji-ping, LIU Yun, LI Guo, LUO Min (Shanghai Institute of Endocrine and Metabolic (Diseases,) Shanghai Clinical Center for Endocrine and Metabolic (Diseases,) Ruijin Hospital, Shanghai Second Medical University, Shanghai200025, China)

【机构】 上海第二医科大学瑞金医院上海市内分泌代谢病临床医学中心上海市内分泌代谢病研究所上海第二医科大学瑞金医院上海市内分泌代谢病临床医学中心上海市内分泌代谢病研究所 上海200025上海200025上海200025

【摘要】 目的采用单核苷酸多态性(SNP)标记,在以往所发现的中国汉族2型糖尿病相关基因定位区域(20q13)内寻找疾病易感基因位点。方法选取70例散发糖尿病病人及其正常配偶作为研究对象,通过生物信息学方法在公共SNP数据库中查找定位区域内11个候选基因的21个SNP位点,用等位基因专一性实时PCR方法进行分型,并做病例—配偶对照关联分析。结果21个SNP中有8个在中国人群中为常见SNP位点。病例—配偶对照关联分析结果显示,PRex1基因的SNP位点rs3936192的等位基因频率在2型糖尿病组和正常对照组间有显著性差异(P=0.0280)。结论上述SNP位点可能与中国汉族2型糖尿病相关,为进一步研究这一位点所在的基因与2型糖尿病的关系提供了理论依据。

【Abstract】 ObjectiveTo probe candidate genes of type 2 diabetes in the chromosome 20q13 which is highly associated with the disease in our former studies.MethodsTwenty-one SNP sites located in 11 candidate genes were chosen from public SNP domain by bioinformatic methods, and the allele-specific real-time PCR method was used to genotype the locations in 70 sporadic type 2 diabetes patients and their normal spouse to perform case-spouse control study(CSCS). Association studies were carried out using different statistical analyses.ResultsAmong the 21 SNPs, 8 were high frequency SNP in the Chinese population and 13 were not. SNP genotyping and association study showed a significant difference (P=0.028) in the allelic frequency of rs3936192 in PRex1 gene between type 2 diabetes patients and normal spouse.ConclusionThe SNP may be associated with type 2 diabetes in the Han Chinese, which lays the basis for further study of the relation between the localized gene with type 2 diabetes.

【基金】 国家重点基础研究发展规划项目(973项目)(199805002);国家自然科学基金(30100084,30100085);上海市高等学校科学技术发展基金(01B08)资助项目.
  • 【文献出处】 上海第二医科大学学报 ,Acta Universitatis Medicinalis Secondae Shanghai , 编辑部邮箱 ,2005年07期
  • 【分类号】R587.1
  • 【被引频次】4
  • 【下载频次】170
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