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酵母双杂交筛选NGAL相互作用蛋白

Identification of proteins interacting with NGAL by yeast two-hybrid technique

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【作者】 麦瑞琴许丽艳方王楷韩溟牛永东王子良李恩民

【Author】 MAI Rui-qin, XU Li-yan, FANG Wang-kai, HAN Ming, NIU Yong-dong, WANG Zi-liang, LI En-min Medical College of Shantou University, Shantou 515031, P.R.China

【机构】 汕头大学医学院肿瘤病理研究室汕头大学医学院生物化学与分子生物学教研室汕头大学医学院生物化学与分子生物学教研室 广东汕头515031广东汕头515031广东汕头515031

【摘要】 目的:中性粒细胞明胶酶相关脂萼蛋 白(neutrophilgelatinase assiociatedlipocalin, NGAL)功能不明,籍筛选与之相互作用蛋白, 构筑相互作用图谱,为揭示其功能提供新途径。 方法:利用蛋白质相互作用原理,应用酵母双杂 交技术,构建pGBKT7 NGAL载体,以NGAL 为诱饵,在人类骨髓cDNA文库中筛选与之相 互作用蛋白的基因。结果:通过酵母交配筛库、 一对一验证和β gal分析筛选出40个阳性克 隆;测序,利用网上数据库(http://www.ncbi. nlm.nih.gov)对序列进行比对,初步确定了31 种基因,其中11种为未知基因,20种为已知基 因。已知基因中含有编码区的有LGALS1、 MT2A、COX1、RNP24、ATP1B3、IGL、IGH VDJ、RARRES2、GYPA、NEB和NPC2。结论: 筛选得到31种可能与NGAL相互作用蛋白的 基因,这为研究NGAL功能及作用机制提供了 新途径。

【Abstract】 OBJECTIVE:The functions of NAGL are not clear at present. This study was to provide a new way to reveal the roles of NGAL protein by screening the proteins interacting with it and constructing the protein-protein interactive networks. METHODS: According to the principle of protein interactions, bait vector pGBKT7-NGAL was constructed and a pre-transformed human bone marrow cDNA library PACT2 the for the proteins that interacting with NGAL by yeast two-hybrid technique. RESULTS: After yeast mating and sequence-transformation screening and nutritional selection as well as β-gal analysis, 40 positive clones of putative interactions were obtained and 31 genes of them were identified by sequencing and utilizing of the data on line (http://www.ncbi.nlm.nih.gov). There were 11 putative genes and 20 known genes, including LGALS1, MT2A, COX1, RNP24, ATP1B3, IGL, IGH VDJ, RARRES2, GYPA, NEB and NPC2.CONCLUSIONS:Thirty-one proteins interacting with NGAL are obtained and an approach is offered for further exploring roles and biochemistry mechanisms of NGAL protein.

【基金】 国家自然科学基金面上项目(39900069,30170428;30370641);广东省自然科学基金重点项目(37788);广东省自然科学基金面上项目(990799,010431);广东省高校自然科学研究项目(200033);广东省医学科研基金项目(A2001419);汕头大学研究与发展基金项目(L0004,L00012)
  • 【文献出处】 肿瘤防治杂志 ,Journal of Qilu Oncology , 编辑部邮箱 ,2005年04期
  • 【分类号】R735.1
  • 【被引频次】2
  • 【下载频次】242
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