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猪圆环病毒2型广东株全基因的克隆与序列分析

Cloning and sequence analysis of complete genomes of type 2 porcine circovirus isolated from Guangdong Province

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【作者】 戚一达余业东孙彦伟罗满林贺东生刘镇明

【Author】 QI Yi-da~1, YU Ye-dong~2, SUN Yan-wei~2, LUO Man-lin~1, HE Dong-sheng~1, LIU Zhen-ming~1(1 College of Veterinary Medicine, South China Agric. Univ., Guangzhou 510642, China;2 Guangdong Provincial Veterinary Station of Epidemic Prevention & Supervision, Guangzhou 510230, China)

【机构】 华南农业大学兽医学院广东省动物防疫监督总所华南农业大学兽医学院 广东广州510642广东广州510230广东广州510642广东广州510642

【摘要】 根据GenBank中发表的已知猪圆环病毒2型(PorcineCircovirus2,PCV2)全基因序列,自行设计2对特异性引物,从2株接种疑似断乳仔猪多系统衰竭综合征(post weaningmultisystemicwastingsyndrome,PMWS)仔猪病料的PK15细胞中提取基因组DNA,以此为模板,用PCR方法分2段扩增2个PCV2广东株(GZ株和ZS株)的全基因序列.应用序列分析软件DNAstar,对所测2组PCV2序列与GenBank中的国内外PCV2毒株进行同源性比较,并绘制系统进化发生树,进行了序列分析.结果表明,2个PCV2广东株全基因组皆为1767bp,2个毒株间全基因序列核苷酸同源性为77.0%,第一开放阅读框(ORF1)间的核苷酸同源性仅为57.7%,而第二开放阅读框(ORF2)间的核苷酸同源性却高达99.1%.ZS株和GenBank中国内外其他的PCV2参考毒株序列的核苷酸同源性在95.7%~99.5%之间;而GZ株和其他PCV2参考毒株序列的核苷酸同源性仅在74.2%~77.1%之间.

【Abstract】 Based on the complete genomic sequence of PCV-2 in GenBank, two sets of primers were designed, and genomic DNA was extracted from PK-15 cell inoculated with pathogenic materials of piglets with PMWS. Complete genomic sequences of two isolates from Guangdong Province were amplified. The two sequences were compared with that of other PCV-2 isolates in GenBank with the DNAStar software, and a phylogenetic tree of PCV-2 strains was drawn. The length of the complete genome of GZ and ZS strains was (1 767) bp; nucleotide similarity of the complete genome among two strains was 77.0%; but nucleotide similarity of ORF1 only was 57.7%, but which of ORF2 was 99.1% among two strais; nucleotide similarity of the complete genome among ZS strain and other strains were from 95.7%-99.5%, and were from 74.2%-77.1% among GZ strain and other strains.

【关键词】 猪圆环病毒2型全基因序列克隆序列分析
【Key words】 PCV-2complete genomecloningsequence analysis
  • 【文献出处】 华南农业大学学报 ,Journal of South China Agricultural University , 编辑部邮箱 ,2005年03期
  • 【分类号】S852.65;Q78
  • 【下载频次】165
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