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HIV/AIDS患者基因变异与疾病关系的研究

Study on relationship between gene variation and disease progression of HIV/AIDS patients

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【作者】 文小宁尚红韩晓旭张旻张子宁王亚男姜拥军

【Author】 WEN Xiao-ning,SHANG Hong,HAN Xiao-xu,et al.AIDS Research Center,the First Affiliated Hospital,China Medical University(Shenyang 110001,China)

【机构】 中国医科大学附属第一医院艾滋病研究所中国医科大学附属第一医院艾滋病研究所 沈阳110001沈阳110001沈阳110001

【摘要】 目的 研究HIV - 1感染者 /AIDS患者体内不同亚型HIV - 1tat基因序列特征、突变特点及与疾病进展的关系。方法 采集辽宁省 2 2例HIV感染者 /AIDS患者的血液样本 ,提取含有整合HIV - 1前病毒的基因组DNA ,nested -PCR扩增后直接测序 ,并做序列排列比对、翻译和分析。结果  2 2株辽宁省流行的HIV - 1病毒分属B’及B’/C重组亚型。AIDS患者体内病毒tat区第一外显子发生氨基酸突变 ,5 8位点出现T取代A ,无症状感染者未发现此变异。此外还发现 7,2 0 ,2 4 ,5 9,6 2 ,6 4位点出现取代变异 ,这些变异在AIDS病组要高于无症状感染组。结论 B’和B’/C重组亚型HIV - 1tat基因第一外显子氨基酸序列发生的变异与疾病进展相关 ;同时还发现AIDS患者的tat基因第一外显子的其它一些取代变异。

【Abstract】 Objective To study on the characters of HIV-1 Tat exon 1 amino acid sequence and mutations and the relationship with disease progression among HIV-1 infected people and AIDS patients.Methods To collect 22 cases’ whole blood samples of HIV carriers and AIDS patients in Liaoning province and to extract the PBMC genome DNA.The HIV-1 tat exon 1 was amplified by nested-PCR with tat specific primers.Products were sequenced directly.Sequences were aligned,translated and analyzed.Results 22 cases HIV-1 strains epidemic in Liaoning were found to be of genetic subtype B’ and B’/C.In AIDS group,finding some amino acid mutations at specific position of tat exon 1,position 58 T substitutes A.This variation appeared only in AIDS group.In addition some other variations in position 7,20,24,59,62,64 were found.AIDS group was higher than asymptomatic HIV-1 infection group as to these variation.Conclusion In AIDS patients of subtype B’ and B’/C,there was amino acid sequence variation of HIV-1 tat exon 1 which position 58 T substituted A,which indicated its relationship with disease progression.At the same time,some other substitution variations of tat exon 1 in AIDS patients was found,whose significance needed further research.

【关键词】 HIV序列分析Tat蛋白基因变异
【Key words】 sequence analysistat proteingenetic variation
【基金】 国家自然科学基金资助项目 (30 2 71 1 88)
  • 【文献出处】 中国公共卫生 ,China Public Health , 编辑部邮箱 ,2004年04期
  • 【分类号】R512.91
  • 【被引频次】7
  • 【下载频次】136
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