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来自中间偃麦草基因组的类反转录转座子片段的克隆及其特征分析

Isolation and Characterisation of a Retrotransposon-like Sequence Derived from Thinopyrum intermedium

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【作者】 马有志富田因则曹丽霞李连城安室喜正

【Author】 MA You Zhi 1, TOMITA Motonori 2, CAO Li Xia 1, LI Lian Cheng 1, YASUMURO Yoshimasa 2 ( 1Key Laboratory of Crop Genetics and Breeding, Ministry of Agriculture, Institute of Crop Breeding and Cultivation, CAAS, Beijing 100081,China; 2Faculty of Agriculture, Tottori University, Koyama Tottori 680, Japan)

【机构】 中国农业科学院作物育种栽培研究所鸟取大学农学部植物遗传育种实验室鸟取大学农学部植物遗传育种实验室 农业部作物遗传育种重点开放实验室北京100081日本鸟取市680农业部作物遗传育种重点开放实验室日本鸟取市680

【摘要】 中间偃麦草 [Thinopyrumintermedium ,(Host)BarkworthandDewey]是普通小麦 (TriticumaestivumL )遗传改良的重要基因源 ,已有许多重要基因导入普通小麦。本研究从中间偃麦草基因组克隆到一个类反转录转座子片段 ,命名为pTi2 8。该序列高丰度存在于中间偃麦草基因组 ,低丰度 (寡拷贝 )存在于普通小麦及其近缘种属硬粒小麦 (T durum)、黑麦 (Secalecereale)、小黑麦和簇毛麦 (Hynaldiavillosa)基因组 ,是中间偃麦草专化重复序列。序列对比分析结果显示 ,pTi2 8与大麦、小麦反转录转座子BARE 1和Wis 2 1A的同源性分别为 6 2 8%、70 8%。Southern及原位杂交结果表明 ,pTi2 8属散在型重复序列 ,可以做为检测中间偃麦草染色质的分子标记

【Abstract】 Thinopyrum intermedium is an important source for improving the genetic variability of Triticum aestivum , and many useful agronomic traits have been introduced into T aestivum In this study, a retrotransposon like sequence was isolated from Th intermedium and designated as pTi28 This sequence was abundant in Th intermedium genome but rare in T aestivum genome and its relatives Sequence similarity analysis indicated that pTi28 was 70 8% similar to Wis 2 1A, a wheat retrotransposon like element and 62 8% identical to BARE 1 element from barley ( Hordeum vulgare ), respectively Southern blots and in situ hybridization results showed that pTi28 was an interspersed repeated DNA sequence and could a useful molecular marker for detection of Th intermedium chromatins in wheat background

【基金】 国家自然科学基金资助项目 ( 3 0 170 5 75 )
  • 【文献出处】 作物学报 ,Acta Agronomica Sinica , 编辑部邮箱 ,2004年04期
  • 【分类号】S336
  • 【被引频次】13
  • 【下载频次】189
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