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一个马铃薯X病毒分离物的外壳蛋白基因序列分析与株系鉴定
Coat protein gene analysis and identification of an isolate of potato virus X
【摘要】 对山东省侵染马铃薯的一个马铃薯X病毒(PVX)分离物PVX-SD1的外壳蛋白(CP)基因进行了克隆和序列分析。以提纯的病毒RNA为模板,应用RTPCR扩增目的基因,通过常规的基因克隆法将扩增的CP基因导入pUC19载体,测序。结果表明,PVX-SD1的CP基因长719bp,可编码248个氨基酸;与Gen-Bank中报道的15个有代表性的株系或分离物相比较,核苷酸同源性在80.1%~99.7%,氨基酸同源性在89.8%~100%;与欧洲株系UK3仅1个核苷酸不同,同源性为99.7%,氨基酸同源性达100%,表明它们可能为同一株系,属于X3细。
【Abstract】 An isolate of potato virus X ( PVX-SD;) was obtained from potato plants cultivated in Shandong Province. The coat protein ( CP) gene of PVX was amplified from the extracted viral RNA by using reverse transcription -poly merase chain reaction (RT-PCR) , and cloned into plasmid pUC19. The nucleotide sequence of the CP gene was determined and compared with other isolates reported in GenBank. It shares 80. 1% -99. 7% and 89. 8% - 100% homology with the reported isolates at the sequence levels of nucleotide and deduced amino acid, respectively. PVX-SD1 shares 99. 7% and 100% homologies at the nucleotide and deduced amino acid levels, respectively, with one of the European strain UK3, indicating that they could belong to the same strain.
- 【文献出处】 植物保护学报 ,Journal of Plant Protection , 编辑部邮箱 ,2003年04期
- 【分类号】S435.32
- 【被引频次】13
- 【下载频次】121