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虎纹蛙病毒的ATP酶基因克隆和序列分析
Cloning and Analysis of RTV ATPase Gene
【摘要】 利用对应于蛙病毒-3型(FV3)ATP酶基因(ATPase)的162-178nt和1 186-1 174nt碱基序列作为引物,采用PCR方法扩增得到虎纹蛙病毒(RTV)的ATP酶基因,并对该基因进行克隆、测序和分析。基因读码框大小为945 bp,预计可编码一相对分子质量为35 500的蛋白质。氨基酸序列比较结果,RTV的ATPase基因与虹彩病毒科蛙病毒属的代表种FV3的一致性最高,为87.9%,与该科其它脊椎动物病毒的一致性在50%~52%之间。ATP酶蛋白质结构域分析可知该基因编码的ATP酶含有Walker型ATP酶AAA族蛋白质的全部结构域,其中既具有Walker型ATP酶所具有的Walker A和Walker B保守区,还含有AAA族蛋白质基因所具有的SRH高度保守区,因此,该基因是一完整的活性蛋白编码基因。
【Abstract】 The putative adenosine triphosphatase (ATPase) gene of Rana tigrina ranavirus (RTV) was amplificated, cloned and sequenced. The ORF of ATPase gene consists of 945 bp, which codes for a protein of 315 aa with a predicted molecular mass of 35 500. The identity of the ATPase gene was 88% and 52% to that of frog virus 3 (FV3) and lymphocystis disease virus (LCDV-1), respectively. The RTV ATPase protein was belonged to AAA (for ATPase associated with diverse cellular activities) protein family of the Walker-type ATPases. There were all of three highly conserved motifs (Walker A, Walker B and SRH) of AAA protein within the amino acid sequence of the RTV ATPase.
【Key words】 Rana tigrina ranavirus; ATPase gene; clone; sequence analysis;
- 【文献出处】 中山大学学报(自然科学版) ,Acta Scientiarum Naturalium Universitatis Sunyatseni , 编辑部邮箱 ,2003年02期
- 【分类号】S917.1
- 【被引频次】2
- 【下载频次】144