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全基因组扫描定位遗传性对称性色素异常症易感区域
Identification of Hereditary Symmetrical Dyschromatosis Susceptibility Locus by Genome-wide Scan
【摘要】 目的确定遗传性对称性色素异常症易感区域。方法用覆盖全基因组22条常染色体的402个微卫星标记对2个遗传性对称性色素异常症大家系进行全基因组扫描,利用Linkage软件(5.10Version)和Cyrillic软件(2.01Version)进行连锁和单倍型分析。结果常染色体显性遗传模式,外显率为100%时,在1号染色体上的微卫星标记D1S2343处获得最大累积LOD积分为8.85(重组率θ=0.00),其相邻2个标记D1S2696和D1S2345处的最大累积LOD积分分别为4.60(重组率θ=0.10)和8.54(重组率θ=0.00)。单倍型分析将易感区域缩小至D1S2696和D1S2635之间11.6cM处。结论染色体1q11-1q21区域存在遗传性对称性色素异常症易感基因。
【Abstract】 Objective To identify a locus for hereditary symmetrical dyschromatosis(HSD).Methods A genome-wide scan was performed with402microsatellite markers in two large Chinese HSD families to map the chromosome location of the susceptible gene.The LINKAGE software(Version5.10)and CYRILLIC soft-ware(Version2.01)were used for linkage and haplotype analysis.Results A locus was identified at chro-mosome1q11-1q21with a cumulative maximum two-point LOD score of8.85at microsatellite marker D1S2343(θ=0.00).Haplotype analysis indicated that the candidate gene was located within11.6cM region between markers D1S2696and D1S2635.This was the first locus identified for HSD.This study provided a map location for isolation of the candidate genes causing HSD.Conclusion Chromosome1q11-1q21contains the candidate gene susceptible for dyschromatosis symmetrica hereditaria.
【Key words】 Chromosome mapping; Linkage(Genetics); Haplotypes; Dyschromatosis symmetrica hereditaria;
- 【文献出处】 中华皮肤科杂志 ,Chinese Journal of Dermatology , 编辑部邮箱 ,2003年12期
- 【分类号】R758.5
- 【被引频次】21
- 【下载频次】198