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免培养法对一热泉细菌多样性的初步研究
Preliminary Study on Bacterial Diversity in a Hot Spring by Using Culture-independent Approach
【摘要】 应用免培养法 (Culture independent)对云南腾冲热海大滚锅高温热泉中细菌的多样性进行初步的分析。经过克隆筛选 ,测定了 5个克隆的 1 6SrDNA插入片段的近全序列 ,系统发育分析的结果表明 ,它们分属于Bacillus、Hydrogenobacter和Pseudomonas,有一个克隆尚难确定其分类地位 ,它属于Thermodesulfobacteriaceae科 ,介于Geothermbacterium属和Thermodesulfo bacteria属之间。经PCR扩增出上述 5个克隆 1 6SrDNA插入序列中及环境样品总DNA中的1 6SrDNAV8高变区约 60 0bp片段 ,进行变性梯度电泳 (DGGE)。所得电泳图谱和 5个序列的系统发育树不仅表明该高温热泉存在着丰富的细菌多样性 ,还显示了它们是该高温热泉中细菌的优势物种
【Abstract】 Bacterial biodiversity of the hot spring Dagunguo in Tengchong Rehai in Yunnan P rovince, China was preliminarily studied with culture-independent method. Five complete 16S rDNA sequences were obtained and phylogenetically analysed. Four of these sequences were closely related to the genera: Bacillus、Hydrogenobacter and Pseudomonas, and the other one was clustered with the Family Thermode sulf obacteriaceae between an unpublished genus Geothermobacterium and Thermode sulfobacteria. The V 8 high variable region(about 600bp) of 16S rDNA from the five 16S rDNA sequences and the genomic DNA were obtained by PCR. All of the PC R products were run DGGE. The pattern of DGGE and the phylogenetic tree of the f ive sequences not only indicated the hot spring Dagunguo of Yunnan province has plenty of bacterial species but also showed they were dominant bacterial species in the hot spring.
【Key words】 Hot spring; Culture-independent approach; DGGE; Microbial diversity;
- 【文献出处】 微生物学报 ,Acta Microbiologica Sinica , 编辑部邮箱 ,2003年05期
- 【分类号】Q938
- 【被引频次】30
- 【下载频次】379