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鲸类c-mos基因的序列变异性及在系统发生分析中应用的初步研究

A Preliminary Study on the Sequence Variability of Cetacean c-mos Genes and its Application in Phylogenetic Analysis

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【作者】 杨光季国庆周开亚魏辅文

【Author】 YANG Guang~1JI Guoqing~1ZHOU Kaiya~1WEI Fuwen~2(1 College of Life Sciences, Nanjing Normal University, Nanjing 210097, China)(2 Insitute of Zoology, the Chinese Academy of Sciences, Beijing 100080, China)

【机构】 南京师范大学生命科学学院遗传资源研究所中国科学院动物研究所 南京210097南京北京100080

【摘要】 通过猪等的c -mos基因保守区序列设计了用于扩增鲸类c -mos基因的引物。应用此引物扩增并测定了齿鲸类 5个科 12个种 5 4 6bp的c -mos基因编码区序列。结果表明鲸类的c -mos基因遗传变异水平较低。在系统发生重建中 ,同科的物种聚为单系 ,但不能很好地解决科下亚科间的关系 ,提示c -mos基因仅适于鲸类科级以上阶元的系统发生研究。

【Abstract】 Primers for amplifying the cetacean c-mos genes were designed based on the alignment of conservative region of c-mos genes from pigs and some other mammals. With these primers, the partial coding region of cetacean c-mos gene, which was 546 base pairs (bp) in length, was amplified by using polymerase chain reaction (PCR) for 23 toothed whales belonging to 12 species of five families. The amplified products were purified and directly sequenced by an ABI 310 automated genetic analyzer. The results suggested a very low level of sequence variation at cetacean c-mos genes. In the phylogenetic analysis using maximum likelihood method incorporated in computer software PHYLIP, species from the same family constituted respective monophyletic groups, but the relationship at subfamily level was not well resolved. This suggested that c-mos gene is an appropriate candidate in the phylogenetic study only at family and/or higher level.

【关键词】 鲸类C-mos基因变异系统发生
【Key words】 CetaceansC-mos geneVariabilityPhylogeny
【基金】 国家自然科学基金资助项目 (3 0 2 70 2 12 ;3 0 0 70 116和 3 980 0 0 14 ) ;国家自然科学基金杰出青年基金资助项目 (3 0 12 5 0 0 6) ;江苏省“青蓝工程”中青年学术带头人科研基金;国家“2 11工程”“十五”建设项目
  • 【文献出处】 兽类学报 ,Acta Theriologica Sinica , 编辑部邮箱 ,2003年04期
  • 【分类号】Q953
  • 【被引频次】10
  • 【下载频次】171
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