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丙型肝炎病毒不同基因区的聚合酶链反应扩增

Detection of hepatitis C virus by polymerase chain reaction with primers deduced from different gene region

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【作者】 魏来陶其敏杜绍财王豪孙焱

【Author】 Wei Lai, Tao Qimin, Du Shaocai, et al. Institute of Hepatology, People′s Hospital, Beijing Medical University, Beijing 100044

【机构】 北京医科大学人民医院肝病研究所

【摘要】 目的探讨提高聚合酶链反应(PCR)对丙型肝炎病毒(HCV)病毒血症的检出率和对变异较大区域的扩增效率的方法。方法分别以HCV基因组5'端非编码区(5'UTR)、非结构基因4区(NS4)及NS5b区的引物检测HCV,并比较双退火温度与单一退火温度对HCV基因扩增效率的影响。结果HCV不同基因区(5′UTR、NS4、NS5b)引物的PCR扩增阳性率分别为92%、62%、59%。以双退火温度扩增NS4区与NS5b区基因,扩增阳性率分别提高到77%与79%。将血清按原血清、10-1~10-10系列稀释后检测,发现2份血清单退火温度PCR的检出水平分别为10-5与10-7,双退火温度PCR检出水平则分别提高至10-8与10-9稀释血清。结论5′UTR引物对HCVRNA的检出率明显高于NS4区与NS5b区引物。双退火温度PCR可显著提高HCVRNA检出的敏感性

【Abstract】 Objective To investigate the effect of variability of hepatitis C virus (HCV) on detection of HCV with polymerase chain reaction (PCR), and establish a method to improve the sensitivity and effectiveness of detection. Methods Detection of HCV was performed with three pairs primers deduced from 5′untranslated region (5′UTR), nonstructural gene 4 (NS4), and nonstructural gene 5 (NS5) of HCV. Positive rates were compared. In addition, the positive rate between one anneling temperature PCR and two annealing temperature PCR was compared as well. Results The positive rates of detection with primers deduced from 5′UTR, NS4 and NS5 were 92%, 62% and 59% respectively. With two annealing temperature PCR, the positive rates were increased to 77% and 79% respectively by primers of NS4 and NS5. In detection by one annealing temperature, detectable levels of 10 5 and 10 7 diluted sera were obtained from sample 1 and sample 2. However, detectable levels were 10 8 and 10 9 diluted sera with two annealing temperature PCR. Conclusion Detection of HCV is more sensitive with primers of 5′UTR than with NS4 or NS5 primer. Two annealing temperature PCR is a candidate for increasing positive rate of variable gene of HCV.

【基金】 国家八五攻关及CMB基金
  • 【文献出处】 中华医学检验杂志 ,Chinese Journal of Laboratory Medicine , 编辑部邮箱 ,1997年06期
  • 【分类号】R512.6
  • 【被引频次】6
  • 【下载频次】25
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