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庚型肝炎病毒广东株与云南株5′端非编码区的比较

HOMOLOGY COMPARISON OF HGV 5’NCR SEQUENCE FROM GUANGDONG STRAIN WITH THAT FROM YUNNAN STRAIN

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【作者】 李刚姚集鲁陈青汤文辉谭德

【Author】 YUNNAN STRAIN Li Gang Yao Jilu Chen Qing Department of Infectious Diseases,Sun Yat-sen University of Medical Sciences,Guangzhou 510630

【机构】 中山医科大学传染病学教研室云南省昆明医学院附属第一医院传染科美国国立卫生研究院 510630广州510630广州

【摘要】 目的:明了中国不同地区(包括广东与云南)庚型肝炎病毒(HGV)株5′端非编码区(NCR)序列的差异。方法:采用逆转录聚合酶链反应扩增 HGV 5′NCR cDNA 片段,产物为238bp,纯化后直接测定核苷酸序列。结果:HGV 广东株与云南株5′NCR 的同源性为96.97%,他们与国外株的同源性介乎86.36%~90.91%。结论:广东株与云南株5′NCR 的同源性较大,与国外分离株的同源性较小;不同碱基在序列中呈散在分布;HGV 核酸变异可能与地域因素有关。

【Abstract】 Objective:To explore the nucleotide sequence variation of 5′ non-coding region (5′NCR) of hepatitis G virus (HGV) strains from different districts in china including Guangdong province and Yunnan province.Methods:HGV 5′NCR cDNA was amplified by reverse transcription polymerase chain reaction(RT-PCR).The products with 238bp size were purified and then directly sequenced.Results:The nucleotide homology of HGV 5′NCR was 96.97% between Guangdong strain and Yunnan strain,86.36%~ 90.91% between them and several reported isolates from abroad.Conclusions:The homology between Guangdong strain and Yunnan strain was higher than that between Guangdong strain or Yunnan strain and isolates from abroad.Different nucleotides were randomly distributed throughout the sequences.Our results suggest that the nucleotide variation of HGV may be associated with geographical factor.

【基金】 国家自然科学基金
  • 【文献出处】 中华肝脏病杂志 ,Chinese Journal of Hepatology , 编辑部邮箱 ,1997年03期
  • 【分类号】R450
  • 【下载频次】8
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