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丙型肝炎病毒基因组5’非编码区酶切分型研究

TYPING OF HEPATITIS C VIRUS GENOMES IN 5’NONE CODING REGION BY RESTRICTION FRAGMENT LENGTH POLYMORPHISM

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【作者】 刘芳华; 田庚善; 傅希贤;

【Author】 Liu Fang-hua,Tian Geng-shan,Fu Xi-xian(First School of Clinical Medicine, Beijing Medical University, Beijing 100034)

【机构】 北京医科大学第一医院;

【摘要】 对105例HCVRNA阳性标本用Sau3AⅠ和HaeⅢ两种酶对其5’NC区扩增产物进行酶切。结果呈现4种酶切类型。对不同酶切类型的扩增产物进行序列分析,结果显示,不同酶切类型的扩增产物都源于HCV,核酸序列中的酶切点与酶切结果完全吻合。对文献中已经确定基因型的33株HCV作了比较,分析了酶切类型与基因型的关系。发现对HCV5’NC区-297至-41片段PCR扩增产物用这两种酶分别酶切,可以把HCV按Chan氏分型(1992)分为1、2、3三组。本文105例标本,1组(包括Ⅰ、Ⅱ型)占82.9%,2组(包括Ⅲ、Ⅳ型)占15.2%,1、2组混合占1.9%,未发现3组。其中以1组(Ⅱ型)为最多,但不超过69.5%。

【Abstract】 PCR products of 5 NC regfon of HCV genome were digested with Sau3AⅠand Hae Ⅲ,respectively in 105 casesof HCV RNA positive sera. Four patterns of restriction fragments were found.Sequence analysis revcaled that allPCR products were originated from HCV genome,no matter of their restriction fragment patterns. The restrictionsites of Sau3AⅠand Hae Ⅲin the sequence were identical.Sequence of 33 HCV isolates with known gene type inliterature were compared,and the relationship between restriction pattern and gene type were analysed.We foundthat HCV could be devided into 3 groups according to Chan’s classification by digcsting the PCR products of-294to -41 segment in HCV 5’NC region with Sau3A Ⅰand Hae Ⅲ,respectively. The incidence of HCV group 1(typesⅠ,Ⅲ) was 82.9%,group 2(typesⅢ,Ⅳ)was 15.2%,and group 1 and 2 mix was 1.9%in 105 cases of samples.No group 3 was found.Group 1(type Ⅲ)was at most,but not more than 69.5%.

  • 【文献出处】 中华微生物学和免疫学杂志 ,CHINESE JOURNAL OF MICROBIOLOGY AND IMMUNOLOGY , 编辑部邮箱 ,1994年01期
  • 【分类号】R373.21
  • 【被引频次】6
  • 【下载频次】32
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