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大肠杆菌青霉素G酰化酶基因及其邻近区域的核苷酸全序列

WHOLE NUCLEOTIDE SEQUENCE OF PENICILLIN G ACYLASE GENE AND ITS FLANKING REGION FROM E.COLI

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【作者】 郭礼和叶增产杨钧王敏韩恒湘张其玖

【Author】 Guo Li-he Ye Zheng-can Yang Jun Wang Min (Shanghai Institute of Cell Biology,Academia Sinica) Han Heng-xiang Zhang Qi-jiu (Institute of Biophysics,Academia Sinica)

【机构】 中国科学院上海细胞生物学研究所中国科学院生物物理研究所中国科学院生物物理研究所

【摘要】 我们由E.coli AS1.76克隆了青霉素G酰化酶的基因,并且测定了其全部核苷酸序列。青霉素G酰化酶结构基因是由下述功能片段组成的:(1)编码信号肽(26个氨基酸残基)的78个碱基对;(2)编码α-亚基(209个氨基酸残基)的627个碱基对;(3)编码间隔肽(54个氨基酸残基)的162个碱基对;(4)编码β亚基(557个氨基酸残基)的1671个碱基对。此外,我们还发现起始密码子(ATG)前有个核糖体结合位点和启动子序列以及在终止密码子(TAA)之后有个转录终止信号。与最近发表的青霉素G酰化酶基因的DNA序列比较,同源性达99.7%。

【Abstract】 Some of microorganisms have been knownto possess penicillin G acylase activity.The E.coli derived penicillin G acylase(PGA) can catalyze the conversion of peni-cillin G into phenylacetic acid and 6-amino-penicillanic acid,the latter is used as thestarting compound for the industrial forma-tion of semi-synthetic penicillins.Apart fromits industrial importance,the enzyme PGAdisplays a number of interesting properties.Catalytically active enzyme is localized inthe periplasmic space of E.coli cells andcomposed of two dissimilar subunits.Thetwo subunits are apparently produced from aprecursor protein,via a processing pathwayhitherto unique in its features for a prokary-otic enzyme.The studies on processing ofthe precursor and on the relationship betweenstructure and function of the mature enzymeare important theoretically. Previously we cloned a 3.5 kb DNAfragment from a strain (E.coli AS 1.76),which displays PGA activity.In this paper,we report a nucleotide sequence of the 3.5kb DNA fragment containing PGA gene.After insertion of the DNA fragment intoEcoR Ⅰ and Hind Ⅲ sites in pWR 13,pPGA 20 had been obtained.We subclonedthe Hind Ⅲ and Bgl Ⅱ treated fragment of1.6 kb in length from pPGA 20 into HindⅢ and BamH Ⅰ sites of pWR 13 to get apPGA 1.6.and Bgl Ⅱ and EcoR Ⅰ treatedfragment of 1.9 kb in length into BamH Ⅰand EcoR Ⅰ sites of pWR 13 to get a pPGA1.9.The linearized pPGA 1.9 which weredigested with appropriate restriction enzymeswere progressively shortened from both endsrespectively by digestion with Bal 31 nu-clease,followed by cleavage of shortened tar-get DNA off vector DNA molcules with ap-proriate restriction enzymes.The series ofthe DNA fragments shortened from EcoR Ⅰend were then cloned into plasmid pWR 13which had previously digested with Hind Ⅲand Sma Ⅰ enzymes (Fig.1).The DNA frag-ment cloned in pWR 13 were directly se-quenced on the resulted plasmids by usingprimer Ⅰ and primer Ⅱ.Thus we have ob-tained the complete nucleotide sequence ofthe 3.5 kb DNA fragment. The 3.5 kb fragment contains an in-tact PGA gene which is 2.6 kb.The openreading frame in the gene consists of fourstructural domains:(i) nucleotide positionsNo.53—130 coding for a signal peptide of theprecusor enzyme,(ii) positions No.131—757coding for alpha-subunit of the mature en-zyme,(iii) positions No.758—919 coding forthe spacer peptide of the precusor enzyme,(iv) positions No.920—2590 coding for beta-subunit of the mature enzyme.Additionallyupstream from the starting codon ATG,thereis a promoter and a PBS (i,e.SD) sequen-ce,and downstream sequence from termina-tion codon TAA,there is a terminator.(Fig.3).

  • 【文献出处】 实验生物学报 ,Acta Biologiae Experimentalis Sinica , 编辑部邮箱 ,1989年01期
  • 【被引频次】9
  • 【下载频次】64
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